Package: clootl 0.1.4

Eliot Miller

clootl: Fetch and Explore the Cornell Lab of Ornithology Open Tree of Life Avian Phylogeny

Fetches the Cornell Lab of Ornithology Open Tree of Life (clootl) tree in a specified taxonomy. Optionally prune it to a given set of study taxa. Provide a recommended citation list for the studies that informed the extracted tree. Tree generated as described in McTavish et al. (2024) <doi:10.1101/2024.05.20.595017>.

Authors:Eliot Miller [aut, cre], Emily Jane McTavish [aut], Luna L. Sanchez Reyes [ctb, aut]

clootl_0.1.4.tar.gz
clootl_0.1.4.zip(r-4.7)clootl_0.1.4.zip(r-4.6)clootl_0.1.4.zip(r-4.5)
clootl_0.1.4.tgz(r-4.6-any)clootl_0.1.4.tgz(r-4.5-any)
clootl_0.1.4.tar.gz(r-4.7-any)clootl_0.1.4.tar.gz(r-4.6-any)
clootl_0.1.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
clootl/json (API)

# Install 'clootl' in R:
install.packages('clootl', repos = c('https://eliotmiller.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/eliotmiller/clootl/issues

Datasets:
  • clootl_data - A complex data store used in the package.

On CRAN:

Conda:

5.76 score 14 stars 25 scripts 551 downloads 7 exports 23 dependencies

Last updated from:c7a92d1b7f. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK331
source / vignettesOK191
linux-release-x86_64OK241
macos-release-arm64OK246
macos-oldrel-arm64OK220
windows-develOK184
windows-releaseOK196
windows-oldrelOK205
wasm-releaseOK112

Exports:extractTreeget_avesdata_repoget_avesdata_repo_pathgetCitationssampleTreesset_avesdata_repo_pathtaxonomyGet

Dependencies:apebitopsclidigestdplyrgenericsgluejsonlitelatticelifecyclemagrittrnlmepillarpkgconfigR6RcppRCurlrlangtibbletidyselectutf8vctrswithr